Scientific Publications

Adolescent Health.
Abdool Karim Q.
South African Medical Journal 2015;105(11):948.

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Understanding and responding to HIV risk in young South African women: Clinical perspectives
Dellar R, Waxman A, Abdool Karim Q.
South African Medical Journal 2015; 105(11):952.

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Adolescent HIV treatment issues in South Africa.
Dawood H.
South African Medical Journal 2015;105(11):953.

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Risk Factors for HIV Acquisition in a Prospective Nairobi-Based Female Sex Worker Cohort.
McKinnon LR, Izulla P, Nagelkerke N, Munyao J, Wanjiru T, Shaw SY, Gichuki R, Kariuki C, Muriuki F, Musyoki H, Gakii G, Gelmon L, Kaul R, Kimani J.
AIDS Behav 2015; 19(12):2204-13.

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Relationship between female genital tract infections, mucosal IL-17 production and local Th17 cells
Masson L, Salkinder AL, Olivier AJ, McKinnon LR, Gamieldien H, Mlisana K, Scriba TJ, Lewis DA, Little F, Jaspan HB, Ronacher K, Denny L, Abdool Karim SS, Passmore JS.
Immunology 2015; 146(4):557-67.

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Targeted screening of at-risk adults for acute HIV-1 infection in sub-Saharan Africa
Sanders EJ, Wahome E, Powers KA, Werner L, Fegan G, Lavreys L, Mapanje C, McClelland RS, Garrett N, Miller WC, Graham SM.
AIDS 2015; 29(Suppl 3):S221-S230.

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Innate antibacterial activity in female genital tract secretions is associated with increased risk of HIV acquisition.
Madan RP, Masson L, Tugetman J, Werner L, Grobler A, Mlisana K, Lo Y, Che D, Arnold KB, Karim Abdool SS, Passmore J-AS, Herold B.
AIDS Research and Human Retroviruses 2015; 31(11):1153-9.

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Host-Directed Therapies Network) Host-Directed Therapies for tackling Multi-Drug Resistant TB - learning from the Pasteur-Bechamp debates.
Zumla A, Chakaya J, Hoelscher M, Ntoumi F, Rustomjee R, Vilaplana C, Yeboah-Manu D, Rasolof V, Munderi P, Singh N, Aklillu E, Padayatchi N for the Host-Directed Therapies Network.
Clinical Infectious Diseases 2015; 61(9):1432-38.

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Trends in HIV prevalence in pregnant women in rural South Africa
Kharsany AB, Frohlich JA, Yende-Zuma N, Mahlase G, Samsunder N, Dellar RC, Zuma-Mkhonza M, Abdool Karim SS, Abdool Karim Q.
JAIDS 2015; 70(3):289-295.

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Challenges with participant reimbursement: experiences from a post-trial access study
Mngadi KT, Frohlich J, Montague C, Singh J, Nkomonde N, Mvandaba N, Ntombeka F, Luthuli L, Abdool Karim Q, Mansoor L.
Journal of Medical Ethics 2015; 41(11):909-13.

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The arrival of a true point-of-care molecular assay—ready for global implementation?
Drain PK, Garrett NJ.
The Lancet Global Health 2015; 3(11): e663–e664.

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Improving adolescent maternal health.
Baxter C, Moodley D.
South African Medical Journal 2015; 105 (11):948-951

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Viral variants that initiate and drive maturation of V1V2-directed HIV-1 broadly neutralizing antibodies
Bhiman JN, Anthony C, Doria-Rose NA, Karimanzira O, Schramm CA, Khoza T, Kitchin D, Botha G, Gorman J, Garrett NJ, Abdool Karim SS, Shapiro L, Williamson C, Kwong PD, Mascola JR, Morris L, Moore PL.
Nature Medicine 2015; 21(11):1332-36.

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HIV-1 superinfection resembles primary infection
Sheward DJ, Ntale R, Garrett NJ, Woodman ZL, Abdool Karim SS, Williamson C.
Journal of Infectious Diseases 2015; 212(6): 904-908.

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Antibody Maturation in Women who Acquire HIV Infection While Using Antiretroviral Pre-Exposure Prophylaxis.
Laeyendecker O, Redd AD, Nason M, Longosz AF, Abdool Karim Q, Naranbhai V, Garrett N, Eshleman SH, Abdool Karim SS, Quinn TC.
Journal of Infectious Diseases 2015; 212(5):754-9.

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Restoration of CD4+ responses to co-pathogens in HIV-infected individuals on antiretroviral therapy is dependent on T cell memory phenotype.
Riou C, Tanko RF, Soares AP, Masson L, Werner L, Garrett NJ, Samsunder N, Abdool Karim Q, Abdool Karim SS, Burgers WA.
Journal of Immunology 2015; 195(5):2273-81.

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Overcoming Impediments to Global Implementation of Early Antiretroviral Therapy.
Abdool Karim SS.
New England Journal of Medicine 2015; 373(9):875-876.

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Comparative Proteomics of Activated THP-1 Cells Infected with Mycobacterium tuberculosis Identifies Putative Clearance Biomarkers for Tuberculosis Treatment.
Kaewseekhao B, Naranbhai V, Roytrakul S, Namwat W, Paemanee A, Lulitanond V, Chaiprasert A, Faksri K.
PLoS ONE 2015; 10(7): e0134168

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Epigenetic mechanisms, T-cell activation, and CCR5 genetics interact to regulate T-cell expression of CCR5, the major HIV-1 coreceptor
Gornalusse G, Mummidi S, Gaitan AA, Jimenez F, Ramsuran V, Picton ACP, Rogers K, Manoharan M, Avadhanam N, Murthy KK, Martinez H, Murillo AM, Chykarenko ZA, Hutt R, Daskalakis D, Shostakovich-Koretskaya L, Abdool Karim SS, Martin JN, Deeks SG, Hecht F, Sinclair E, Clark RA, Okulicz J, Valentine FT, Martinson N, Tiemessen CT, Ndung’u T, Hunt PW, He W, Ahuja SK.
PNAS 2015; 112(34): E4762-E4771. doi: 10.1073/pnas.1423228112

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Primary capreomycin resistance is common, and associated with early mortality in extensively drug-resistant tuberculosis (XDR-TB) patients in KwaZulu-Natal, South Africa.
O’Donnell M, Pillay M, Pillay M. Werner L, Master I, Wolf A, Mathema B, Coovadia Y, Mlisana K, Horsburgh R, Padayatchi N.
JAIDS 2015; 69(5):536–543.

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CAPRISA 004 Trial Group. Tenofovir Gel for the Prevention of Herpes Simplex Virus Type 2 Infection
Abdool Karim SS, Abdool Karim Q, Kharsany ABM, Baxter C, Grobler AC, Werner L, Kashuba A, Mansoor LE, Samsunder N, Mindel A, Gengiah TN.
New England Journal of Medicine 2015; 373(6):530-9.

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Lower concentrations of chemotactic cytokines and soluble innate factors in the lower female genital tract associated with the use of injectable hormonal contraceptive.
Ngcapu S, Masson L, Sibeko S, Werner L, McKinnon LR, Mlisana K, Shey M, Samsunder N, Abdool Karim SS, Abdool Karim Q, Passmore J-AS.
Journal of Reproductive Immunology 2015; 110 (2015) 14–21.

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Towards host-directed therapies for tuberculosis.
Zumla A, Chakaya J, Hoelscher M, Ntoumi F, Rustomjee R, Vilaplana C, Yeboah-Manu D, Rasolof V, Munderi P, Singh N, Aklillu E, Padayatchi N, Macete E, Kapata N, Mulenga M, Kibiki G, Mfinanga S, Nyirenda T, Maboko L, Garcia-Basteiro A, Rakotosamimanana N, Bates M, Mwaba P, Reither K, Gagneux S, Edwards S, Mfinanga E, Abdulla S, Cardona P-J, Russell JBW, Gant V, Noursadeghi M, Elkington P, Bonnet M, Menendez C, Dieye TN, Diarra B, Maiga A, Aseffa A, Parida S, Wejse C, Petersen E, Kaleebu P, Oliver M, Craig G, Corrah T, Tientcheu L, Antonio M, Rao M, McHugh TD, Sheikh A, Ippolito G, Ramjee G, Kaufmann SHE, Churchyard G, Steyn A, Grobusch M, Sanne I, Martinson N, Madansein R, Wilkinson RJ, Mayosi B, Schito M, Wallis RS, Maeurer M.
Nature Reviews Drug Discover 2015; 14(8):511-2.

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The UNAIDS-Lancet Commission: Defeating AIDS—advancing global health.
Piot P, Abdool Karim SS, Hecht R, Legido-Quigley H, Buse K, Stover J, Ryckman T, Resch S, Mogedal S, Dybul M, Goosby E, Watts C, Kilongo N, McManus J, Sidibe M on behalf of the Lancet- Unaids Commission on HIV/AIDS.
Lancet 2015; 386: 171-218.

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Genital inflammation and the risk of HIV acquisition in women.
Masson L, Passmore JA, Liebenberg LJ, Werner L, Baxter C, Arnold KB, Williamson C, Little F, Mansoor LE, Naranbhai V, Lauffenburger DA, Ronacher K, Walzl G, Garrett NJ, Williams BL, Couto-Rodriguez M, Hornig M, Lipkin WI, Grobler A, Abdool Karim Q, Abdool Karim SS.
Clinical Infectious Diseases 2015; 61(2):260-269.

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HIV-1 replication capacity: Setting the pace of disease
Williamson C, Swanstrom R.
PNAS 2015; 112(12): 3591-3592.

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Randomized Cross-Sectional Study to Compare HIV-1 Specific Antibody and Cytokine Concentrations in Female Genital Secretions Obtained by Menstrual Cup and Cervicovaginal Lavage.
Archary D, Liebenberg LJ, Werner L, Tulsi S, Majola N, Naicker N, Dlamini S, Hope TJ, Samsunder N, Abdool Karim SS, Morris L, Passmore J-AS, Garrett NJ.
PLoS One 2015; 10(7):e0131906.

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Risk factors for HIV acquisition in high risk women in a generalised epidemic setting.
Naicker N, Kharsany ABM, Werner L, van Loggerenberg F, Mlisana K, Garrett N, Abdool Karim SS.
AIDS and Behavior 2015; 19(7):1305-16.

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A novel reporter phage to detect tuberculosis and rifampin resistance in a high-HIV-burden population.
O’Donnell MR, Pym A, Jain P, Munsamy V, Wolf A, Karim F, Jacobs WR, Larsene MH.
Journal of Clinical Microbiology 2015; 53(7):2188-94.

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South African HIV-1 subtype C transmitted variants with a specific 1 V2 motif show higher dependence on α4β7 for replication.
Richardson SI, Gray ES, Mkhize NN, Sheward DJ, Lambson BE, Wibmer CK, Masson L, Werner L4, Garrett N, Passmore J-AS, Abdool Karim Q, Abdool Karim SS, Williamson C, Moore PL, Morris L.
Retrovirology 2015; 12(1):54. doi: 10.1186/s12977-015-0183-3.

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Inflammation and HIV Transmission in Sub-Saharan Africa.
Kaul R, Prodger J, Joag V, Shannon B, Yegorov S, Galiwango R, McKinnon L.
Curr HIV/AIDS Rep 2015; 2015 June; 12(2): 216-222.

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Risk of HIV-1 acquisition among women who use different types of injectable progestin contraception in South Africa: a prospective cohort study.
Noguchi LM, Richardson BA, Baeten JM, Hillier SL, Balkus JE, Chirenje ZM, Bunge K, Ramjee G, Nair G, Palanee-Phillips T, Selepe P, van der Straten A, Parikh UM, Gomez K, Piper JM, Watts DH, Marrazzo JM, for the VOICE Study Team.
Lancet HIV 2015; 2(7):e279-287.

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Differences in HIV type 1 neutralization breadth in 2 geographically distinct cohorts in Africa.
Bandawe G, Moore PL, Werner L, Gray ES, Sheward DJ, Madiga M, Nofemela A, Thebus R, Marais JC, Maboko L, Abdool Karim SS, Hoelscher M, Morris L, Williamson C.
Journal of Infectious Diseases 2015; 211(9):1461-66.

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Antibodies for HIV prevention in young women.
Abdool Karim SS Abdool Karim Q, Baxter C.
Current Opinion in HIV and AIDS 2015; 10(3):183-189.

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A Qualitative Study of Patient Motivation to Adhere to Combination Antiretroviral Therapy in South Africa.
van Loggerenberg F, Gray D, Gengiah S, Kunene P, Gengiah TN, Naidoo K, Grant AD.
AIDS patient care and STDs 2015; 29(5):299-306.

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Ability To Develop Broadly Neutralizing HIV-1 Antibodies Is Not Restricted by the Germline Ig Gene Repertoire.
Scheepers C, Shrestha RK, Lambson BE, Jackson KJ, Wright IA, Naicker D, Goosen M, Berrie L, Ismail A, Garrett N, Abdool Karim Q, Abdool Karim SS, Moore PL, Travers SA, Morris L.
Journal of Immunology 2015; 194(9):4371-8.

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HIV broadly neutralizing antibody targets.
Wibmer CK, Moore PL, Morris L.
Current O pinion in HIV and AIDS 2015; 10(3):135-142.

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Virological features associated with the development of broadly neutralizing antibodies to HIV-1.
Moore PL, Williamson C, Morris L.
Trends in Microbiology 2015; 23(4): 203-211.

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Evaluation of adherence measures of antiretroviral prophylaxis in HIV exposed infants in the first 6 weeks of life.
Desmond AC, Moodley D, Conolly CA, Castel SA, Coovadia HM.
BMC pediatrics 2015; 15(1):23-30.

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A scoping review and thematic analysis of social and behavioural research among HIV-serodiscordant couples in high-income settings.
Mendelsohn JB, Calzavara L, Daftary A, Mitra S, Pidutti J, Allman D, Bourne A, Loutfy M, Myers T.
BMC Public Health 2015; 15(1):241.

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The spectrum of skin diseases in a black population in Durban, kwazulu-Natal, South Africa. International Journal of Dermatology
Dlova NC, Mankahla A, Madala N, Grobler A, Tsoka-Gwegweni J, Hift RJ.
International Journal of Dermatology 2015; 54(3):279-85.

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Evolution of extensively drug-resistant tuberculosis over four decades: whole genome sequencing and dating analysis of Mycobacterium tuberculosis isolates from KwaZulu-Natal.
Cohen KA, Abeel T, McGuire AM, Desjardins CA, Munsamy V, Shea TP, Walker BJ, Bantubani N, Almeida DV, Alvarado D, Chapman SB, Mvelase NR, Duffy EY, Fitzgerald MG, Govender P, Gujja S, Hamilton S, Howarth C, Larimer JD, Maharaj K, Pearson MD, Priest ME, Zeng Q, Padayatchi N Grosset J, Young SK, Wortman J, Mlisana KP, O'Donnell MR, Birren BW, Bishai WR, Pym AS, Earl AM.
Plos Medicine 2015; 12(9):e1001880.

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Routine feedback of test results to participants in clinic- and survey-based surveillance of HIV.
Baggaley R, Johnson C, Garcia Calleja JM, Sabin K, Obermeyer C, Taegtmeyer M, Zaba B, El-Hayek C, Singh JA.
Bulletin of the World Health Organization 2015; 95(5): 352-355.

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Surgical Treatment of Complications of Pulmonary Tuberculosis, including Drug-Resistant Tuberculosis.
Madansein R, Parida S, Padayatchi N, Singh N, Master I, Naidu K, Zumla A, Maeurer M.
International Journal of Infectious Diseases 2015; 32: 61-67.

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Cellular therapy in Tuberculosis
Parida SK, Madansein R, Singh N, Padayatchi N, Master I, Naidu K, Zumla A, Maeurer M.
International Journal of Infectious Diseases 2015; 32: 32-38.

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Adolescent girls and young women: key populations for HIV epidemic control.
Dellar RC, Dlamini S, Abdool Karim Q.
Journal of the International AIDS Society 2015; 18(2):64-70.

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Innovations in research ethics governance in humanitarian settings
Schopper D, Dawson A, Upshur R, Ahmad A, Jesani A, Ravinetto R, Segelid MJ, Sheel S, Singh J.
BMC Medical Ethics 2015; 16(1):10.

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Skin lightening practices: an epidemiological study of South African women of African and Indian ancestries.
Dlova NC, Hamed SH, Tsoka‐Gwegweni J, Grobler A.
British Journal of Dermatology 2015;173(Suppl. 2):2-9. doi: 10.1111/bjd.13556.

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Injectable Progestin-Only Contraception is Associated With Increased Levels of Pro-Inflammatory Cytokines in the Female Genital Tract.
Deese J, Masson L, Miller W, Cohen M, Morrison C, Wang M, Ahmed K, Agot K, Crucitti T, Abdellati S, Van Damme L.
American Journal of Reproductive Immunology 2015; 74(4):357-67.

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Strengthening HIV surveillance in the antiretroviral therapy era: rationale and design of a longitudinal study to monitor HIV prevalence and incidence in the uMgungundlovu District, KwaZulu-Natal, South Africa.
Kharsany AB, Cawood C, Khanyile D, Grobler A, Mckinnon LR, Samsunder N, Frohlich JA, Abdool Karim Q, Puren A, Welte A, George G, Govender K, Toledo C, Chipeta Z, Zembe L, Glenshaw MT, Madurai L, M Deyde V, Bere A.
BMC Public Health. 2015; 15(1):1149.

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Evaluating community engagement in global health research: The need for metrics Ethics in Biomedical Research (Review).
MacQueen, K.M, Bhan, A, Frohlich J, Holzer J, Sugarman J.
BMC Medical Ethics 2015; 16(1):44. doi: 10.1186/s12910-015-0033-9.

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The diagnostic accuracy of urine lipoarabinomannan test for tuberculosis screening in a South African correctional facility.
Hanifa Y, Telisinghe L, Fielding KL, Malden JL, Churchyard GJ, Grant AD, Charalambous S.
PLoS One 2015; 10(5):e0127956.

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Characteristics of women enrolled into a randomized clinical trial of dapivirine vaginal ring for HIV-1 prevention.
Palanee-Phillips T, Schwartz K, Brown ER, Govender V, Mgodi N, Kiweewa FM, Nair G, Mhlanga F, Siva S, Bekker L-G, Jeenarain N, Gaffoor Z, Martinson F, Makanani B, Naidoo S, Pather A, Phillip J, Husnik MJ, Van Der Straten A, Soto-Torres Ll, Baeten J.
PLoS One 2015; 10(6): e0128857.

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Continued Follow-Up of Phambili Phase 2b Randomized HIV-1 Vaccine Trial Participants Supports Increased HIV-1 Acquisition among Vaccinated Men.
Moodie Z, Metch B, Bekker LG, Churchyard G, Nchabeleng M, Mlisana K, Laher F, Roux S, Mngadi K, Innes C, Mathebula M, Allen M, Bentley C, Gilbert PB, Robertson M, Kublin J, Corey L, Gray GE.
PLoS One 2015; 10(9):e0137666.

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Care of the patient with XDR-TB who has failed treatment.
Jacobson KB, Tate M, Eksteen F, Moll A, Padayatchi N, Friedland G, Shenoi S.
Lancet Respiratory Medicine 2015; 3(4):269-270.

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Tenofovir-Based Preexposure Prophylaxis for HIV Infection among African Women.
Marrazzo JM, Ramjee G, Richardson BA, Gomez K, Mgodi N, Nair G, Palanee T, Nakabiito C, van der Straten A, Noguchi Hendrix C, Dai JY, Ganesh S, Mkhize B, Taljaard M, Parikh UM, Piper J, Mâsse B, Grossman C, Rooney J, Schwartz JL, Watts H, Marzinke MA, Hillier SL, McGowan IM, Chirenje M, for the VOICE Study Team.
New England Journal of Medicine 2015; 372(6): 509-518.

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Community-based care vs. centralised hospitalisation for MDR-TB patients KwaZulu-Natal, South Africa.
Loveday M, Wallengren K, Brust JCM, Roberts J, Voce A, Margot , Ngozo J, Master I, Cassell G, Padayatchi N.
The International Journal of Tuberculosis and Lung Disease 2015; 19(2):163-71.

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HIV-Positive Status Disclosure in Patients in Care in Rural South Africa: Implications for Scaling up Treatment and Prevention Interventions
Abdool Karim Q, Dellar RC, Bearnot B, Werner L, Frohlich JA, Kharsany AB, Abdool Karim SS.
AIDS & Behavior 2015; 19(2):322-9.

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High prevalence and incidence of asymptomatic sexually transmitted infections during pregnancy and postdelivery in KwaZulu Natal, South Africa
Moodley D, Moodley P, Sebitloane M, Soowamber D, McNaughton-Reyes H, Groves A, Maman S
Sexually Transmitted Diseases 2015; 42(1): 43-47.

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Hormonal Contraception and the Risk of HIV Acquisition: An Individual Participant Data Meta-analysis
Morrison CS, Chen P-L, Kwok C, Baeten JM, Brown J, Crook AM, Van Damme L, Delany-Moretlwe S, Francis SC, Friedland BA, Hayes RJ, Heffron R, Kapiga S, Abdool Karim Q, Karpoff S, Kaul R, McClelland RS, McCormack S, McGrath N, Myer L, Rees H, van der Straten A, Watson-Jones D, van de Wijgert JHH, Stalter R, Low N.
PLoS Medicine 2015; 12(1): e1001778.

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HIV Disease Progression in Seroconvertors from the CAPRISA 004 Tenofovir Gel Pre-exposure Prophylaxis Trial.
Garrett N, Werner L, Naicker N, Naranbhai V, Sibeko S, Samsunder N, Gray C, Williamson C, Morris L, Abdool Karim Q, Abdool Karim SS.
JAIDS 2015; 68(1):55-61.

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Optimizing HIV prevention for women: A review of evidence from microbicide studies and considerations for gender-sensitive microbicide introduction.
Doggett EG, Lanham M, Wilcher R, Gafos M, Abdool Karim Q, Heise L.
Journal of the International AIDS Society 2015; 18(1):20536.

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Prevalence and trends of staphylococcus aureus bacteraemia in hospitalized patients in South Africa, 2010 to 2012: Laboratory-based surveillance mapping of antimicrobial resistance and molecular epidemiology.
Perovic O, Iyaloo S, Kularatne R, Lowman W, Bosman N, Wadula J, Seetharam S, Duse A, Mbelle N, Bamford C, Dawood H, Mahabeer Y, Bhola P, Abrahams S, Singh-Moodley A.
PLoS ONE 2015; 10(12): e0145429.

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Non-Cationic Proteins Are Associated with HIV Neutralizing Activity in Genital Secretions of Female Sex Workers.
Birse KDM, Cole AL, Hirbod T, McKinnon L, Ball TB, Westmacott GR, Kimani J, Plummer F, Cole AM, Burgener A, Broliden K.
PLoS One 2015; 10(6):e0130404.

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Early HIV-1 infection is associated with reduced frequencies of cervical Th17 cells.
McKinnon L, Nyanga B, Kim C, Izulla P, Kwatampora J, Kimani M, Shahabi K, Mugo N, Smith J, Anzala AO, Kimani J, Kaul R.
JAIDS 2015; 68(1):6-12.

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The contrasting cultures of HIV and tuberculosis care.
Daftary A, Calzavara L, Padayatchi N.
AIDS 2015; 29(1):1-4.

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Mx2 expression is associated with reduced susceptibility to HIV infection in highly exposed HIV seronegative sex workers from Nairobi, Kenya.
Stein DS, Shaw SY, McKinnon LR, Abou M, McCorrister SJ, Westmacott GR, Fowke KR, Plummer FA. Ball TB.
AIDS 2015; 29(1):35-41.

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Naicker N, Kharsany ABM, Werner L, van Loggerenberg F, Mlisana K, Garrett N, Abdool Karim SS.
Risk factors for HIV acquisition in high risk women in a generalised epidemic setting. AIDS and Behavior 2015; DOI 10.1007/s10461-015-1002-5

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High Prevalence and Incidence of Asymptomatic Sexually Transmitted Infections during Pregnancy and Post Delivery in KwaZulu Natal, South Africa.
Moodley D, Moodley P, Sebitloane M, Soowamber D, McNaughton-Reyes H, Groves A, Maman S.
Sexually Transmitted Diseases 2015; 42(1):43-47.

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Adolescent antiretroviral management: Understanding the complexity of non-adherence
Naidoo K, Munsami A, Archary M.
South African Medical Journal 2015; 105(11):953.

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