Exercise	Comment
Clustalx	This tutorial will help you become familiar with the clustalX software program and also will give you an understanding of how various parameters can be changed and how this will potentially affect the resulting alignment.
PAUP	This practical session will help you become familiar with the program PAUP.  This is the most important software program for reconstructing phylogenetic relationships between macromolecular sequences.
Protein phylogeny	This practical will help you become familiar with many of the issues that are relevant for reconstructing the relationships between protein sequences. The software that will be used will be the program PUZZLE and the MOLPHY package.